PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pavir.8NG184500.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
Family bZIP
Protein Properties Length: 166aa    MW: 18268.3 Da    PI: 6.5397
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pavir.8NG184500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.69.9e-1262117560
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                          k+ rr+  NRe+ArrsR+R++  +  Le  v  L++eN +L k++  ++++++  +
  Pavir.8NG184500.1.p  62 KKMRRMLLNRESARRSRRRRESHLCDLESQVSRLTSENASLLKRMADMTQKYQDAT 117
                          899***************************************99999999888655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.8E-1158122IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-1059114No hitNo description
PROSITE profilePS5021710.93260114IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.46E-1062113No hitNo description
PfamPF001707.2E-1062114IPR004827Basic-leucine zipper domain
PfamPF124987.1E-7129160IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
EDSQVARIEH TGDGGGASLV TNNSNVLGRD DYQGDPINSG TSKEQSDACV NLEEKGDPAN  60
EKKMRRMLLN RESARRSRRR RESHLCDLES QVSRLTSENA SLLKRMADMT QKYQDATLDN  120
RNLIIAVETM RTKVNIAEEA VRRLSGTTLL LSSTSELPPS MSSVS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17481RRSRRRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001142918.13e-66uncharacterized protein LOC100275351
TrEMBLB4FYB53e-66B4FYB5_MAIZE; BZIP transcription factor
STRINGGRMZM2G073427_P029e-66(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75952943
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.28e-18bZIP family protein